Table 2: Orthologues of S. cerevisiae and K. lactis to the product of gene, which was inserted by kanMX4 in mutants.

Mutant Disrupted gene Source organism Accession number Orthologue Function and description a Query length Target length E-value Target coverage Alignment coverage Identity Positive
DG2 KLMA_20059 Saccharomyces cerevisiae S288c NP_011480 Mig1p Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion 556 504 1.9E-38 91% 41% 18% 23%
Kluyveromyces lactis NRRL Y-1140 XP_454446 Hypothetical protein Uniprot|P50898 K. lactis MIG1 Regulatory protein MIG1 556 474 5.57E-132 85% 100% 50% 62%
DG4 KLMA_20787 Saccharomyces cerevisiae S288c NP_014872 Wtm2p Transcriptional modulator involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats 455 467 7.51E-77 100% 100% 35% 51%
Kluyveromyces lactis NRRL Y-1140 XP_453386 Hypothetical protein Similar to gnl|GLV|CAGL0M02563g Candida glabrata CAGL0M02563g and weakly similar to uniprot|Q12206 YOR229W S. cerevisiae WTM2 455 450 1.7E-170 99% 100% 56% 72%
DG6 KLMA_60099 Saccharomyces cerevisiae S288c NP_014673 Dfg16p Probable multiple transmembrane protein; involved in diploid invasive and pseudohyphal growth upon nitrogen starvation; is glycosylated and phosphorylated; interacts with Rim21p and Rim9p in the plasma membrane to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; required for accumulation of processed Rim101p 479 619 4.1E-59 100% 81% 25% 44%
Kluyveromyces lactis NRRL Y-1140 XP_454708 Hypothetical protein Some similarities with uniprot|Q99234 S. cerevisiae YOR030W DFG16 479 482 1.42E-178 100% 100% 56% 74%
DG9 KLMA_20447 Saccharomyces cerevisiae S288c NP_011977 Ctm1p Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) in the cytosol; not required for normal respiratory growth 511 585 1.32E-44 100% 100% 27% 49%
Kluyveromyces lactis NRRL Y-1140 XP_454919 Hypothetical protein Weakly similar to uniprot|P38818 YHR109W S. cerevisiae CTM1 511 503 4.65E-175 98% 99% 50% 67%
DG41 KLMA_60404 Saccharomyces cerevisiae S288c NP_015276 Dig1p MAP kinase-responsive inhibitor of the Ste12p transcription factor, involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p 376 452 4.00E-07 100% 43% 14% 23%
Kluyveromyces lactis NRRL Y-1140 XP_453577 Hypothetical protein Conserved hypothetical protein 376 372 4.3E-132 99% 100% 58% 70%
DG50 KLMA_40242 Saccharomyces cerevisiae S288c NP_010622 Msn5p Karyopherin involved in nuclear import and export of proteins, including import of replication protein A and export of Swi6p, Far1p, and Pho4p; required for re-export of mature tRNAs after their retrograde import from the cytoplasm 1221 1224 0 100% 100% 67% 84%
Kluyveromyces lactis NRRL Y-1140 XP_456046 Hypothetical protein Highly similar to uniprot|P52918 S. cerevisiae YDR335W MSN5 1221 1221 0 100% 100% 91% 97%
DG54 KLMA_60055 Saccharomyces cerevisiae S288c NP_011743 Alg10p Dolichyl-phosphoglucose-dependent alpha-1,2 glucosyltransferase of the ER, functions in the pathway that synthesizes the dolichol-linked oligosaccharide precursor for N-linked protein glycosylation, has a role in regulation of ITR1 and INO1 509 525 0 100% 100% 56% 73%
Kluyveromyces lactis NRRL Y-1140 XP_454662 Hypothetical protein Similar to uniprot|P50076 S. cerevisiae YGR227W DIE2 509 533 0 100% 100% 80% 89%
DG68 KLMA_10391 Saccharomyces cerevisiae S288c NP_012750 Nnk1p Protein kinase; implicated in proteasome function; interacts with TORC1, Ure2 and Gdh2; overexpression leads to hypersensitivity to rapamycin and nuclear accumulation of Gln3; epitope-tagged protein localizes to the cytoplasm 806 928 8.04E-103 100% 93% 31% 46%
Kluyveromyces lactis NRRL Y-1140 XP_451302 Hypothetical protein Similar to uniprot|Q757Y0 Ashbya gossypii AEL120W AEL120Wp and some similarities with YKL171W uniprot|P36003 S. cerevisiae YKL171W 806 800 0 99% 100% 69% 82%
DG71 KLMA_60409 Saccharomyces cerevisiae S288c NP_011265 Zip2p Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress 678 704 1.06E-19 100% 100% 25% 45%
Kluyveromyces lactis NRRL Y-1140 XP_453570 Hypothetical protein Weakly similar to uniprot|P53061 S. cerevisiae YGL249W ZIP2: Required for 'ZIPpering' up meiotic chromosomes during chromosome synapsis involved in meiotic recombination and disjunction 678 675 2.29E-157 100% 100% 40% 62%
DG72 KLMA_70178 Saccharomyces cerevisiae S288c NP_010990 Rgi2p Hypothetical protein; involved in energy metabolism under respiratory conditions; protein abundance is increased upon intracellular iron depletion; protein abundance increases in response to DNA replication stress 161 161 1.12E-70 100% 99% 68% 79%
Kluyveromyces lactis NRRL Y-1140 XP_452559 Hypothetical protein Highly similar to uniprot|P40188 S. cerevisiae YIL057C Hypothetical ORF 161 163 2.25E-105 100% 100% 91% 94%
DG79 KLMA_20626 Saccharomyces cerevisiae S288c NP_014071 Mdj2p Constituent of the mitochondrial import motor associated with the presequence translocase; function overlaps with that of Pam18p; stimulates the ATPase activity of Ssc1p to drive mitochondrial import; contains a J domain 148 146 4.81E-48 99% 100% 49% 75%
Kluyveromyces lactis NRRL Y-1140 XP_454039 Hypothetical protein Similar to uniprot|P42834 S. cerevisiae YNL328C MDJ2: Protein of the mitochondrial inner membrane function partially overlaps that of Mdj1p which is a chaperone involved in folding of mitochondrially synthesized proteins in the mitochondrial matrix member of the DnaJ family 148 146 9.36E-78 99% 99% 76% 92%
DG80 KLMA_30168 Saccharomyces cerevisiae S288c NP_012447 Arg3p Ornithine carbamoyltransferase (carbamoylphosphate: L-ornithine carbamoyltransferase), catalyzes the sixth step in the biosynthesis of the arginine precursor ornithine 340 338 0 99% 98% 72% 83%
Kluyveromyces lactis NRRL Y-1140 XP_455725 Hypothetical protein Similar to uniprot|P05150 YJL088W S. cerevisiae ARG3 340 334 0 98% 94% 85% 90%