Table 4: Amino acid polymorphisms in the predicted protein sequences of Moroccan Pepino mosaic virus isolates. a Distance from the first amino acid of the protein. Frequency of mutation was calculated from a total of 12 isolates.
|
Position a |
CH2 |
PepMV-MA |
Frequency |
RdRp |
1301 |
Lysine |
Arginine |
41% (5/12) |
1306 |
Glycine |
Serine |
16.6 % (2/12) |
1310 |
Alanine |
Glycine |
16.6 % (2/12) |
1391 |
Serine |
Alanine |
8.3 % (1/12) |
TGB1 |
44 |
Serine |
Alanine |
16.6 % (2/12) |
106 |
Tyrosine |
Histidine |
8.3 % (1/12) |
168 |
Lysine |
Arginine |
16.6 % (2/12) |
TGB2 |
69 |
Histidine |
Arginine |
8.3 % (1/12) |
74 |
Leucine |
Isoleucine |
8.3 % (1/12) |
95 |
Phenylalanine |
Leucine |
8.3 % (1/12) |
114 |
Glutamine |
STOP codon |
8.3 % (1/12) |
CP |
42 |
Lysine |
Methionine |
8.3 % (1/12) |
72 |
Alanine |
Serine |
41.6% (5/12) |